Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912254.1_cds_XP_016462293.1_55534
CDS Infomation

[gene=LOC107785485] [db_xref=GeneID:107785485] [protein=IRK-interacting protein-like] [protein_id=XP_016462293.1] [location=22117..23532] [gbkey=CDS]
Sequence

ATGCCAGTAGAAATGGAAGGAACAACAAAACCTCCACAAATTTCTGATATGTTTCACAAA
TTCGCTCATGTTGTCCGTACCAAAACCTTCGAACTCTTCGCCGATGAAACCGACGACGAA
AACACCTCCAACTCCACTGATGTCTTCACTCTCTTCAGTTCCGCTGAGGAATTTATCCCT
AATCAAAAAGTTGTTGTTATAAAACCCGATTTCTGTAAATTCCCAGAAAATGAAAATACC
CATTTTACTAAATCCCTAATTTCTTCACTTTTTGCTACAATTTCGTCATTTGAAGCTTCT
TATCTTCAGTTGCAAACAGCTCACGTGCCGTTCGACGAAAAAGCTATCGAGTCGGCTGAT
AAAGTTTTGGTATCAGTTCTTCAGAAATTGACTGAAATGAAGAATTTGTATAGGGATTTT
AGGAAAAACCCAAGTTCTAATTTTGATGATCTTGTAGGGTCAGAATTGGAATTTCAGGTT
CAAGAGAATCAGAGCAAGCTCAGAGTTTTGGAGACTATGGTAAATCAGTTAATGTCTTTT
ATGGATTCTAAAGATGATGAAGTTTTGATTTTGAGGAAAAAACTGGAAAAATTGGAACTT
TTTAATTCCAATTTGTCAAAAAAATTAGGGGTTAAAAATAAAAATTTGGAGAATACCAGT
GTGGAGGTATTGTGTACAGTTACTGTATTTGAATCTATGTTACGCGATTCAATTAAGTTA
GTGAATAAATTTTGTAAGTTGTTAATGGAGTTAATGAAAAGAGCAGGTTGGGATTTGGAG
AAAGCAGCAAATTCTGTGTATTCTGATGTTAATTATGCTGAAAAAGGACACTTTAAATAT
GCATTTAGTTCATATATTTGTTTGGGCATGTTTAAGGGCTTTGATCTTGAAGATTTTGGT
TTATCTGATGAAGAAATGTTGTGTAATGAGGATGGTTTAATGTCTGGTGAAAATGATTGT
TTGAAACAATTACTTGAGCATGTTTCGTGTAATCCGATGGAGGTTTTGAGTAAGAATCCT
AATTCTGCGTTTTCAAGATTTTGTGAGAAGAAGTACGAGCAGATTATTCATCCTACAATA
GAATCGTCGATTTTTAGAAATTTGGATGGGAAAGAAGTCATAGTGGATTCGTGGAAGTCC
TTAAGTGTGTTTTACGAGTTGTTTGTGAGGATGGCAAGTGCGATATGGTTGCTTCATAAG
TTGGCGTTTTCGTTTAATCCTGTAGTCGAGATATTCCAAGTCGAGAGAGGGGTTGACTTT
TCGATGGTGTACATGGATGATGTTTCAAGGAAAAGTCGATTCCCTTTGAGCAAGACGAGG
CCAAAGGTGGGATTTACCGTGGTACCTGGATTTAAAATTGGGAGGACAATTATTCAGACA
CAGGTTTATTTAACTGGCTTAAAATGCACGGAATAG

Peptide Sequence

PEP ID

XP_016462293.1
PEP Infomation

PREDICTED: IRK-interacting protein-like [Nicotiana tabacum]
Sequence

MPVEMEGTTKPPQISDMFHKFAHVVRTKTFELFADETDDENTSNSTDVFTLFSSAEEFIP
NQKVVVIKPDFCKFPENENTHFTKSLISSLFATISSFEASYLQLQTAHVPFDEKAIESAD
KVLVSVLQKLTEMKNLYRDFRKNPSSNFDDLVGSELEFQVQENQSKLRVLETMVNQLMSF
MDSKDDEVLILRKKLEKLELFNSNLSKKLGVKNKNLENTSVEVLCTVTVFESMLRDSIKL
VNKFCKLLMELMKRAGWDLEKAANSVYSDVNYAEKGHFKYAFSSYICLGMFKGFDLEDFG
LSDEEMLCNEDGLMSGENDCLKQLLEHVSCNPMEVLSKNPNSAFSRFCEKKYEQIIHPTI
ESSIFRNLDGKEVIVDSWKSLSVFYELFVRMASAIWLLHKLAFSFNPVVEIFQVERGVDF
SMVYMDDVSRKSRFPLSKTRPKVGFTVVPGFKIGRTIIQTQVYLTGLKCTE

Transcript Sequence

Gene sequence data has not been registered.